{
    "dsDNA_basic": { 
        "input": "../input_pdbs/1bna.pdb",
        "contig": "A1-10,/0,B15-24,/0,120-130",
        "length": "140-150",
        "ori_token": [24,20,10],
        "is_non_loopy": true
    },
    "ssDNA_basic": {
        "input": "../input_pdbs/5o4d.pdb",
        "contig": "A1-23,/0,120-130",
        "length": "143-153",
        "ori_token": [-5,-10,8],
        "is_non_loopy": true
    },
    "ssDNA_diffused_from_dsDNA_pdb":{
        "input": "../input_pdbs/1bna.pdb",
        "contig": "A1-10,/0,120-130",
        "length": "130-140",
        "select_fixed_atoms": {"A1-10":""},
        "is_non_loopy": true
    },
    "RNA_basic": {
        "input": "../input_pdbs/1q75.pdb",
        "contig": "A1-15,/0,120-130",
        "length": "135-145",
        "ori_token": [15,2,-4],
        "is_non_loopy": true
    },
    "dsDNA_complex": {
        "input": "../input_pdbs/2r5z.pdb",
        "contig": "C5-18,/0,D24-37,/0,40-50,A146-154,80-90",
        "length": "157-177",
        "unindex": "/0,/0,B251-255",
        "select_fixed_atoms": {
            "C9-14":"ALL",
            "D28-33":"ALL",
            "C5-8,C15-18": "",
            "D24-27,D34-37": ""
        },
        "ori_token":[25,35,20],
        "select_hbond_acceptor": {"C16":"N7,O6", "D31-32":"N7", "D28-30":"OP1,OP2,O3',O5'"},
        "select_hbond_donor": {"D31-32":"N6"},
        "is_non_loopy": true

    }
}